![]() ![]() The RefS forms a part of the name of the full name of the SH is thus used for scientific communication.Īccession code of the reference sequence - each SH has a unique accession code - e.g. herbarium specimen, living culture, soil, water, air, tissue of other organism, etc. It may originate from any biological sample, viz. Reference sequence (RefS) – serves as a name anchor for the Species Hypothesis and is chosen manually by an expert to define the SH. What are reference and representative sequences? UNITE is a community effort that relies on the scientific expertise of its users – please consider contributing by, e.g., annotating sequences of your taxa of expertise. Owing to the mycological roots of UNITE, two versions of the release files are available: all eukaryotes (including fungi), and fungi only. A range of search and query options are available, and precompiled reference datasets for local sequence similarity searches and HTS pipelines are available for download. ![]() Registration is needed to access the more powerful features of the accompanying PlutoF workbench. ![]() The user can interact with these species hypotheses (e.g., SH1566366.08FU) in various ways, and third-party sequence and metadata annotation are supported. All eukaryotic ITS sequences from the International Nucleotide Sequence Database Collaboration are clustered to approximately the species level (distance between species in steps of 0.5%), and all such species hypotheses are given a DOI to facilitate unambiguous scientific communication and data assembly. UNITE is a database and sequence management environment centered on the eukaryotic nuclear ribosomal ITS region. ![]()
0 Comments
Leave a Reply. |
AuthorWrite something about yourself. No need to be fancy, just an overview. ArchivesCategories |